#CALL GENEIOUS PRIME PLUS#

Show labels: When this is unchecked, only the annotation arrow is shown on the sequence and not the annotation name. Show only annotations: Turns off all other annotation types and shows only this type. This will bring up a popup menu containing the following options: To customize the way an annotation type is displayed, click on the preview of the annotation arrow in the Annotation and Tracks window. This is useful for navigating large genomes or assemblies. This will move the selection in the sequence view to the next or previous instance of that annotation type. To quickly find and move between instances of a particular annotation type on a sequence, click the small left/right buttons to the right of each annotation type. To filter for a term in a specific field, click the down arrow to the right of the box and choose the field and term you wish to search for. Typing a term in this field will highlight any annotations that contain the entered text in their name or qualifiers. Note that turning an annotation type off does not remove it from the sequence, it only hides it from view.ĭirectly beneath the Show Annotations box is a filter text field. Individual annotation types can be turned on or off using the checkboxes to the left of the annotation type, or all annotations can be turned off by unchecking Show Annotations at the top of the panel. Tracks with only one annotation type will show a single listing, whilst tracks with multiple annotations will show a list of the annotation types. Annotations that are directly on the sequence are listed first, followed by annotations on tracks underneath. If a sequence contains annotations, the the annotation types present on the sequence will be listed in the Annotations and Tracks tab to the right of the sequence viewer denoted by the arrow icon. Viewing and Customizing Annotations: The Annotations and Tracks tab

#CALL GENEIOUS PRIME PLUS#

This will display a tooltip, listing the Name, Type, Length, Interval and Sequence for that annotation plus any additional qualifiers. To view the properties of a given annotation, mouse over it in the sequence viewer. These can be added at the time an annotation is created, or at a later date by editing the annotation. Tracks are stacked vertically underneath the sequence in question, with a separate line for each track and its annotations.Īn annotation may have one or more properties or qualifiers associated with them. A track is a collection of one or more annotation types. Annotations can either be annotated directly on a sequence in the sequence viewer, or they can be grouped logically into tracks. Working with Annotations Viewing, editing and extracting annotationsĪnnotations are used to describe and visualize features, such as coding regions, restriction sites and repetitive elements, on sequences and alignments.

Call geneious prime